Synthesis of C8-Arylamine-Modified 2?-Deoxyadenosine Phosphoramidites and their Site-Specific Incorporation into Oligonucleotides

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Autor/in:
Erscheinungsjahr:
2012
Medientyp:
Text
Schlagworte:
  • Deoxyguanosine
  • DNA Adducts
  • DNA polymerase
  • Glutathione Transferase
  • Aromatic Polycyclic Hydrocarbons
  • Meta-Analysis As Topic
  • Deoxyguanosine
  • DNA Adducts
  • DNA polymerase
  • Glutathione Transferase
  • Aromatic Polycyclic Hydrocarbons
  • Meta-Analysis As Topic
Beschreibung:
  • Adducts of C8-(N-acetyl)-arylamines and 2'-deoxyadenosine were synthesised by palladium-catalysed C?N cross-coupling chemistry. These 2'-dA adducts were converted into the corresponding 3'-phosphoramidites and site-specifically incorporated into DNA oligonucleotides, which were characterised by mass spectrometry, UV thermal-stability assays and circular dichroism. These modified oligonucleotides were also used in EcoRI restriction assays and in primer-extension studies with three different DNA polymerases. The incorporation of the 2'-dA lesion close to the EcoRI restriction site dramatically reduced the susceptibility of the DNA strand to cleavage; this indicates a significant local distortion of the DNA double helix. The incorporation of the acetylated C8-2'-dA-phosphoramidites into 20-mer oligonucleotides failed, however, because the N-acetyl group was lost during the deprotection process. Instead the corresponding C8-NH-2'-dA-modified oligonucleotides were obtained. The effect of the C8-NH-arylamine-dA lesion on the replication by DNA polymerases was clearly dependent both on the polymerase used and on the arylamine-dA damage.
Lizenz:
  • info:eu-repo/semantics/restrictedAccess
Quellsystem:
Forschungsinformationssystem der UHH

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oai:www.edit.fis.uni-hamburg.de:publications/fb99575e-6f0e-4309-bc4d-77b65c5149ad